Items where Author is "Antunes, André"

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Rettberg, Petra, Antunes, André, Brucato, John, Cabezas, Patricia, Collins, Geoffrey, Haddaji, Alissa, Kminek, Gerhard, Leuko, Stefan, McKenna-Lawlor, Susan, Moissl-Eichinger, Christine, Fellous, Jean-Louis, Olsson-Francis, Karen, Pearce, David, Rabbow, Elke, Royle, Samuel, Saunders, Mark, Sephton, Mark, Spry, Andy, Walter, Nicolas, Schweingruber, Robert Wimmer and Treuet, Jean-Charles (2019) Biological Contamination Prevention for Outer Solar System Moons of Astrobiological Interest: What Do We Need to Know? Astrobiology. ISSN 1531-1074 DOI https://doi.org/10.1089/ast.2018.1996

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Devaynes, Andrew, Antunes, André, Bedford, Alan and Ashton, Paul (2018) Bacterial species richness at three stages of the breeding season in Cyanistes caeruleus (blue tit). Acta Oecologica, 92. pp. 123-130. ISSN 1146-609X DOI https://doi.org/10.1016/j.actao.2018.09.001

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Devaynes, Andrew, Antunes, André, Bedford, Alan and Ashton, Paul (2018) Progression in the bacterial load during the breeding season in nest boxes occupied by the Blue Tit and its potential impact on hatching or fledging success. Journal of Ornithology. pp. 1-9. ISSN 2193-7192 DOI https://doi.org/10.1007/s10336-018-1577-5

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Ghofran, Othoum, Bougouffa, Salim, Razali, Rozaimi, Bokhari, Ameerah, Alamoundi, Soha, Antunes, André, Gao, Xin, Hoehndorf, Robert, Arold, Stefan T, Gojobori, Takashi, Hirt, Heribert, Mijakovic, Vladimir B, Mijakovic, Ivan, Bajic, Vladimir B, Lafi, Feras F and Essack, Magbubah (2018) In silico exploration of Red Sea Bacillus genomes for natural product biosynthetic gene clusters. BMC Genomics, 19 (382). pp. 1-11. ISSN 1471-2164 DOI https://doi.org/10.1186/s12864-018-4796-5

Kaartvedt, Stein, Antunes, André, Røstad, Anders, Klevjer, Thor A and Vestheim, Hege (2016) Zooplankton at deep Red Sea brine pools. Journal of Plankton Research, 38 (3). pp. 679-684. ISSN 0142-7873 DOI https://doi.org/10.1093/plankt/fbw013

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Alzubaidy, Hanin, Essack, Magbubah, Malas, Tareq B, Bokhari, Ameerah, Motwalli, Olaa, Kamanu, Frederick Kinyua, Jamhor, Suhaiza Ahmad, Mokhtar, Noor-Azlin, Antunes, André, Simões, Marta Filipa, Alam, Intikhab, Bougouffa, Salim, Lafi, Feras F, Bajic, Vladimir B and Archer, John A C (2016) Rhizosphere microbiome metagenomics of gray mangroves (Avicennia marina) in the Red Sea. Gene, 576 (Part 1). pp. 626-636. ISSN 0378-1119 DOI https://doi.org/10.1016/j.gene.2015.10.032

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Antunes, André (2015) Fueling the Bio-economy: European Culture Collections and Microbiology Education and Training. Trends in Microbiology, 24 (2). pp. 77-79. ISSN 0966-842X DOI https://doi.org/10.1016/j.tim.2015.11.010

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Salhi, Adil, Essack, Magbubah, Radovanovic, Aleksandar, Marchand, Benoit, Bougouffa, Salim, Antunes, André, Simões, Marta Filipa, Lafi, Feras F., Motwalli, Olaa A., Bokhari, Ameerah, Malas, Tariq, Al Amoudi, Soha, Othum, Ghofran, Allam, Intikhab, Minet, Katsuhiko, Gao, Xin, Hoehndorf, Robert, Archer, John A. C., Gojobori, Takashi and Bajic, Vladimir B. (2015) DESM: portal for microbial knowledge exploration systems. Nucleic acids research, 44(D1). D624-D633. ISSN 0305-1048 DOI https://doi.org/10.1093/nar/gkv1147

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Simões, Marta Filipa, Antunes, André, Ottoni, Cristiane, Amini, Mohammad, Intikhab, Alam, Alzubaidy, Hanin, Mokhtar, Noor-Azlin, Archer, John and Bajic, Vladimir (2015) Soil and Rhizosphere Associated Fungi in Gray Mangroves (Avicennia marina) from the Red Sea — A Metagenomic Approach. Genomics, Proteomics & Bioinformatics, 13 (5). pp. 310-320. ISSN 1672-0229 DOI https://doi.org/10.1016/j.gpb.2015.07.002

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Antunes, André, Alam, Intikhab, Simões, Marta Filipa, Daniels, Camille, Ferreira, Ari J S, Siam, Rania, El Dorry, Hamza and Bajic, Vladimir B (2015) First Insights into the Viral Communities of the Deep-sea Anoxic Brines of the Red Sea. Genomics, Proteomics & Bioinformatics, 13 (5). pp. 304-309. ISSN 1672-0229 DOI https://doi.org/10.1016/j.gpb.2015.06.004

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Guan, Yue, Hikmawan, Tyas, Antunes, André, Ngugi, David and Stingl, Ulrich (2015) Diversity of methanogens and sulfate-reducing bacteria in the interfaces of five deep-sea anoxic brines of the Red Sea. Research in Microbiology, 166 (9). pp. 688-699. ISSN 0923-2508 DOI https://doi.org/10.1016/j.resmic.2015.07.002

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Oliver, Graham, Vestheim, Hege, Antunes, André and Kaartvedt, Stein (2014) Systematics, functional morphology and distribution of a bivalve (Apachecorbula muriatica gen. et sp. nov.) from the rim of the ‘Valdivia Deep’ brine pool in the Red Sea. Journal of the Marine Biological Association of the United Kingdom, 95 (3). pp. 523-535. ISSN 0025-3154 DOI https://doi.org/10.1017/S0025315414001234

Kamanda Ngugi, David, Blom, Jochen, Alam, Intikhab, Rashid, Masmoon, Ba-Alawi, Wail, Zhang, Guishan, Hikmawan, Tyas, Guan, Yue, Antunes, André, Siam, Rania, Dorry, Hamza El, Bajic, Vladimir and Stingl, Ulrich (2014) Comparative genomics reveals niche adaptations of an abundant halotolerant thaumarchaeon in the brine-seawater interface of Red Sea’s brine pools. The ISME Journal, 9. pp. 396-411. ISSN 1751-7362 DOI https://doi.org/10.1038/ismej.2014.137

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Antunes, André, Piessens, Veerie and Nelson, Lima (2014) Offer, demand, and needs in training and education: a study focusing on microbial culture collections within the MIRRI Consortium. New Biotechnology, 31 (S155). S155. ISSN 1871-6784 DOI https://doi.org/10.1016/j.nbt.2014.05.2005

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Ferreira, Ari J S, Siam, Rania, Setubal, João C., Moustafa, Ahmed, Sayed, Ahmed, Chambergo, Felipe S, Dawe, Adam S, Ghazy, Mohamed A, Sharaf, Hazem, Ouf, Amged, Alam, Intikhab, Abdel-Haleem, Alyaa M, Lehvaslaiho, Heikki, Ramadan, Eman, Antunes, André, Stingl, Ulrich, Archer, John A C, Jankovic, Boris R, Sogin, Mitchell, Bajic, Vladimir B and El-Dorry, Hamza (2014) Core Microbial Functional Activities in Ocean Environments Revealed by Global Metagenomic Profiling Analyses. PloS one, 9 (6). e97338. ISSN 1932-6203 DOI https://doi.org/10.1371/journal.pone.0097338

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Werner, Johannes, Ferrer, Manuel, Michel, Gurvan, Mann, Alexander J, Huang, Sixing, Juarez, Silvia, Ciordia, Sergio, Albar, Juan P, Alcaide, Maria Alcaide, La Cono, Violetta, Yakimov, Michail M, Antunes, André, Taborda, Marco, da Costa, Milton S, Hai, Tran, Glöckner, Frank Oliver, Golyshina, Olga V, Golyshin, Peter N, Teeling, Hanno and MAMBA consortium, The (2014) Halorhabdus tiamatea: Proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader. Environmental microbiology, 16 (8). pp. 2525-2537. ISSN 1462-2912 DOI https://doi.org/10.1111/1462-2920.12393

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Sagar, Sunil, Esau, Luke, Hikmawan, Tyas, Antunes, André, Holtermann, Karie, Stingl, Ulrich, Bajic, Vladimir B and Kaur, Mandeep (2013) Cytotoxic and apoptotic evaluations of marine bacteria isolated from brine-seawater interface of the Red Sea. BMC complementary and alternative medicine, 13. p. 29. ISSN 1472-6882 DOI https://doi.org/10.1186/1472-6882-13-29

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Alam, Intikhab, Antunes, André, Kamau, Allan Anthony, Ba Alawi, Wail, Kalkatawi, Manal, Stingl, Ulrich and Bajic, Vladimir B (2013) INDIGO - INtegrated Data Warehouse of MIcrobial GenOmes with Examples from the Red Sea Extremophiles. PloS one, 8 (12). e82210. ISSN 1932-6203 DOI https://doi.org/10.1371/journal.pone.0082210

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Siam, Rania, Mustafa, Ghada A, Sharaf, Hazem, Moustafa, Ahmed, Ramadan, Adham R, Antunes, André, Bajic, Vladimir B, Stingl, Uli, Marsis, Nardine G R, Coolen, Marco J L, Sogin, Mitchell, Ferreira, Ari J S and Dorry, Hamza El (2012) Unique Prokaryotic Consortia in Geochemically Distinct Sediments from Red Sea Atlantis II and Discovery Deep Brine Pools. PloS one, 7 (8). e42872. ISSN 1932-6203

Ngugi, David Kamanda, Antunes, André, Brune, Andreas and Stingl, Ulrich (2012) Biogeography of pelagic bacterioplankton across an antagonistic temperature-salinity gradient in the Red Sea. Molecular Ecology, 21 (2). pp. 388-405. DOI https://doi.org/10.1111/j.1365-294X.2011.05378.x

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Siam, Rania, Mustafa, Ghada A, Sharaf, Hazem, Moustafa, Ahmed, Ramadan, Adham R, Antunes, André, Bajic, Vladimir B, Stingl, Uli, Marsis, Nardine G R, Coolen, Marco J L, Sogin, Mitchell, Ferreira, Ari J S and Dorry, Hamza El (2012) Unique prokaryotic consortia in geochemically distinct sediments from Red Sea Atlantis II and discovery deep brine pools. PLOS One, 7 (8). e42872. ISSN 1932-6203 DOI https://doi.org/10.1371/journal.pone.0042872

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Antunes, André, Alam, Intikhab, El Dorry, Hamza, Siam, Rania, Robertson, Anthony, Bajic, Vladimir B and Stingl, Ulrich (2011) Genome sequence of Salinisphaera shabanensis, a gammaproteobacterium from the harsh, variable environment of the brine-seawater interface of the Shaban Deep in the Red Sea. Journal of Bacteriology, 193 (17). pp. 4551-4552. ISSN 0021-9193 DOI https://doi.org/10.1128/JB.05459-11

Antunes, André, Ngugi, David Kamanda and Stingl, Ulrich (2011) Microbiology of the Red Sea (and other) deep-sea anoxic brine lakes. Environmental Microbiology Reports. no-no. ISSN 1758-2229 DOI https://doi.org/10.1111/j.1758-2229.2011.00264.x

Antunes, Carlos Lemos, Almeida, Tony R, Raposeiro, Nélia, Gonçalves, Belarmino, Almeida, Paulo and Antunes, André (2010) A Tubular Electrode for Radiofrequency Ablation Therapy. World Academy of Science, Engineering and Technology. pp. 517-523. ISSN 2010-376X

Taborda, Marco, Antunes, André, Nobre, M Fernanda, Tiago, Igor, Veríssimo, António and da Costa, Milton S (2009) Description of Idiomarina insulisalsae sp. nov., isolated from the soil of a sea salt evaporation pond, proposal to transfer the species of the genus Pseudidiomarina to the genus Idiomarina and emended description of the genus Idiomarina. Systematic and applied microbiology, 32 (6). pp. 371-378. ISSN 0723-2020 DOI https://doi.org/10.1016/j.syapm.2009.06.005

Antunes, André, Rainey, Fred A, Wanner, Gerhard, Taborda, Marco, Pätzold, Jürgen, Nobre, M Fernanda, da Costa, Milton S and Huber, Robert (2008) A new lineage of halophilic, wall-less, contractile bacteria from a brine-filled deep of the Red Sea. Journal of Bacteriology, 190 (10). pp. 3580-3587. ISSN 0021-9193 DOI https://doi.org/10.1128/JB.01860-07

Antunes, André, Taborda, Marco, Huber, Robert, Moissl, Christine, Nobre, M Fernanda and da Costa, Milton S (2008) Halorhabdus tiamatea sp. nov., a non-pigmented, extremely halophilic archaeon from a deep-sea, hypersaline anoxic basin of the Red Sea, and emended description of the genus Halorhabdus. International journal of systematic and evolutionary microbiology, 58 (Pt 1). pp. 215-220. ISSN 1466-5026 DOI https://doi.org/10.1099/ijs.0.65316-0

Antunes, André, França, Luis, Rainey, Fred A, Huber, Robert, Nobre, M Fernanda, Edwards, Katrina J and da Costa, Milton S (2007) Marinobacter salsuginis sp. nov., isolated from the brine-seawater interface of the Shaban Deep, Red Sea. International journal of systematic and evolutionary microbiology, 57 (Pt 5). pp. 1035-1040. DOI https://doi.org/10.1099/ijs.0.64862-0

Antunes, André, Eder, Wolfgang, Fareleira, Paula, Santos, Helena and Huber, Robert (2003) Salinisphaera shabanensis gen. nov., sp. nov., a novel, moderately halophilic bacterium from the brine-seawater interface of the Shaban Deep, Red Sea. Extremophiles : life under extreme conditions, 7 (1). pp. 29-34. ISSN 1431-0651 DOI https://doi.org/10.1007/s00792-002-0292-5

Antunes, André, Rainey, Fred A, Nobre, M Fernanda, Schumann, Peter, Ferreira, Ana Margarida, Ramos, Ana, Santos, Helena and da Costa, Milton S (2002) Leuconostoc ficulneum sp. nov., a novel lactic acid bacterium isolated from a ripe fig, and reclassification of Lactobacillus fructosus as Leuconostoc fructosum comb. nov. International Journal of Systematic and Evolutionary Microbiology, 52 (Pt 2). pp. 647-655. ISSN 1466-5026 DOI https://doi.org/10.1007/s00792-002-0292-5

Book Section

Göker, Markus and Antunes, André (2018) Haloplasma. In: Whitman, W.B., Rainey, P., Kampfer, P., Trujillo, M., Chun, J., DeVos, B., Hedlund, B. and Dedysh, S. (eds). Bergey’s Manual of Systematics of Archaea and Bacteria,. John Wiley & Sons. ISBN 9781118960608 (In Press)

Antunes, André (2018) Haloplasmataceae. In: Whitman, W.B., Rainey, P., Kampfer, P., Trujillo, M., Chun, J., DeVos, B., Hedlund, B. and Dedysh, S. (eds). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons. ISBN 9781118960608 (In Press)

Antunes, André (2018) Haloplasmatales. In: Whitman, W.B., Rainey, P., Kampfer, M., Trujillo, M., Chun, J., DeVos, P., Hedlund, B. and Dedysh, S. (eds). Bergey’s Manual of Systematics of Archaea and Bacteria. John Wiley & Sons. ISBN 9781118960608 (In Press)

Antunes, André, Simões, Marta Filipa, Crespo-Medina, Melitza, Vetriani, Costantino and Shimane, Yasuhiro (2017) Salinisphaera. In: Whitman, William (ed). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons. ISBN 9781118960608 DOI https://doi.org/10.1002/9781118960608.gbm01423

Antunes, André (2017) Extreme Red Sea: Life in the Deep-Sea Anoxic Brine Lakes. In: Agius, Dionysius, Khali, Emad, Scerri, Eleanor and Williams, Alun (eds). Human Interaction with the Environment in the Red Sea. Brill, Leiden, pp. 30-47. ISBN 9789004330825 DOI https://doi.org/10.1163/9789004330825_004

Antunes, André, Simões, Marta Filipa, Grotzinger, Stefan W, Eppinger, Jorg, Braganca, Judith and Bajic, Vladimir (2016) Bioprospecting Archaea: Focus on Extreme Halophiles. In: Paterson, Russell and Nelson, Lima (eds). Bioprospecting: Success, Potential and Constraints. Springer International Publishing, Berlin, pp. 81-112. ISBN 978-3-319-47933-0 DOI https://doi.org/10.1007/978-3-319-47935-4_5

Antunes, André, Ferrer, Manuel and Yarza, Pablo (2016) Halorhabdus. In: Whitman, William (ed). Bergey's Manual of Systematics of Archaea and Bacteria. John Wiley & Sons, Inc., pp. 1-9. ISBN 9781118960608

Vetriani, Costantino, Crespo-Medina, Melitza and Antunes, André (2014) The Family Salinisphaeraceae. In: Rosenberg, Eugene, DeLong, Edward, Lory, Stephen, Stackebrandt, Erko and Thompson, Fabiano (eds). The Prokaryotes: Gammaproteobacteria. Springer, Berlin, pp. 591-596. ISBN 978-3-642-38921-4 DOI https://doi.org/10.1007/978-3-642-38922-1_296

Antunes, André (2014) The Family Haloplasmataceae. In: Rosenberg, E (ed). The Prokaryotes – Firmicutes and Tenericutes. Springer-Verlag Berlin Heidelberg, pp. 179-184. ISBN 13:9783642301193